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The Python ensemble sampling toolkit for affine-invariant MCMC

Python 1,545 439 Updated Nov 10, 2025

A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation

Python 77 11 Updated Aug 12, 2025

Up to 100x faster strings for C, C++, CUDA, Python, Rust, Swift, JS, & Go, leveraging NEON, AVX2, AVX-512, SVE, GPGPU, & SWAR to accelerate search, hashing, sorting, edit distances, sketches, and m…

C 2,959 105 Updated Oct 31, 2025

Hera makes Python code easy to orchestrate on Argo Workflows through native Python integrations. It lets you construct and submit your Workflows entirely in Python. ⭐️ Remember to star!

Python 818 115 Updated Nov 13, 2025

An open-source AI agent that brings the power of Gemini directly into your terminal.

TypeScript 82,538 9,263 Updated Nov 15, 2025

A generalized computational framework for biomolecular modeling.

Python 318 26 Updated Oct 23, 2025

Statistical package in Python based on Pandas

Python 1,846 159 Updated Aug 30, 2025

Interaction Fingerprints for protein-ligand complexes and more

Python 448 86 Updated Oct 30, 2025

Type annotations for specifying, validating, and serializing arrays with arbitrary backends in Pydantic (and beyond)

Python 130 3 Updated Oct 11, 2025

Multiple Protein Structure Alignment at Scale with FoldMason

C 196 21 Updated Oct 17, 2025

A lightweight, dependency-free Python library (and command-line utility) for downloading YouTube Videos.

Python 13,005 2,528 Updated Aug 15, 2024

Explore genomes in the terminal. Light, blazing fast 🚀, vim-motion.

Rust 417 16 Updated Nov 6, 2025

Concise GitHub Action for installing a Rust toolchain

Shell 1,417 72 Updated Nov 10, 2025

A Python Package for Protein Dynamics Analysis

Python 510 169 Updated Oct 23, 2025

A generative world for general-purpose robotics & embodied AI learning.

Python 27,623 2,539 Updated Nov 14, 2025

Build complex types from simple blueprints with Pydantic

Python 26 Updated Oct 15, 2025

👻 Ghostty is a fast, feature-rich, and cross-platform terminal emulator that uses platform-native UI and GPU acceleration.

Zig 38,207 1,232 Updated Nov 15, 2025

Feature-rich Python implementation of the tximport package for gene count estimation.

Python 37 2 Updated Oct 24, 2025

Official repository for the Boltz biomolecular interaction models

Python 3,443 683 Updated Oct 3, 2025

Lightweight and extensible compatibility layer between dataframe libraries!

Python 1,375 172 Updated Nov 14, 2025

PyComplexHeatmap: A Python package to plot complex heatmap (clustermap)

Python 357 35 Updated Oct 16, 2025

Code for running RFdiffusion

Python 2,564 533 Updated Nov 13, 2025

Menu plugin for neovim ( supports nested menus ) made using volt

Lua 627 12 Updated Jun 1, 2025

A Python type checker

Python 376 41 Updated Oct 27, 2025

Protein Structure Analysis

Python 63 8 Updated Sep 30, 2025

Extra blocks for scikit-learn pipelines.

Python 1,370 121 Updated Nov 12, 2025

Contrastive PCA

Jupyter Notebook 229 54 Updated Oct 7, 2025

A high-performance BigWig and BigBed library in Rust

Rust 107 8 Updated Oct 21, 2025

Python package built to ease deep learning on graph, on top of existing DL frameworks.

Python 14,135 3,058 Updated Jul 31, 2025
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