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The Python ensemble sampling toolkit for affine-invariant MCMC

Python 1,547 439 Updated Nov 10, 2025

A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation

Python 78 11 Updated Aug 12, 2025

Up to 100x faster strings for C, C++, CUDA, Python, Rust, Swift, JS, & Go, leveraging NEON, AVX2, AVX-512, SVE, GPGPU, & SWAR to accelerate search, hashing, sorting, edit distances, sketches, and m…

C 2,979 108 Updated Nov 27, 2025

Hera makes Python code easy to orchestrate on Argo Workflows through native Python integrations. It lets you construct and submit your Workflows entirely in Python. ⭐️ Remember to star!

Python 825 115 Updated Nov 26, 2025

An open-source AI agent that brings the power of Gemini directly into your terminal.

TypeScript 85,077 9,673 Updated Nov 28, 2025

A generalized computational framework for biomolecular modeling.

Python 325 26 Updated Nov 20, 2025

Statistical package in Python based on Pandas

Python 1,852 160 Updated Aug 30, 2025

Interaction Fingerprints for protein-ligand complexes and more

Python 452 86 Updated Oct 30, 2025

Type annotations for specifying, validating, and serializing arrays with arbitrary backends in Pydantic (and beyond)

Python 131 3 Updated Oct 11, 2025

Multiple Protein Structure Alignment at Scale with FoldMason

C 198 21 Updated Oct 17, 2025

A lightweight, dependency-free Python library (and command-line utility) for downloading YouTube Videos.

Python 13,013 2,528 Updated Aug 15, 2024

Explore genomes in the terminal. Light, blazing fast 🚀, vim-motion.

Rust 423 16 Updated Nov 6, 2025

Concise GitHub Action for installing a Rust toolchain

Shell 1,424 72 Updated Nov 20, 2025

A Python Package for Protein Dynamics Analysis

Python 514 169 Updated Oct 23, 2025

A generative world for general-purpose robotics & embodied AI learning.

Python 27,706 2,559 Updated Nov 28, 2025

Build complex types from simple blueprints with Pydantic

Python 26 Updated Oct 15, 2025

👻 Ghostty is a fast, feature-rich, and cross-platform terminal emulator that uses platform-native UI and GPU acceleration.

Zig 38,684 1,265 Updated Nov 28, 2025

Feature-rich Python implementation of the tximport package for gene count estimation.

Python 39 2 Updated Oct 24, 2025

Official repository for the Boltz biomolecular interaction models

Python 3,490 698 Updated Oct 3, 2025

Lightweight and extensible compatibility layer between dataframe libraries!

Python 1,396 175 Updated Nov 28, 2025

PyComplexHeatmap: A Python package to plot complex heatmap (clustermap)

Python 361 36 Updated Oct 16, 2025

Code for running RFdiffusion

Python 2,599 544 Updated Nov 20, 2025

Menu plugin for neovim ( supports nested menus ) made using volt

Lua 632 12 Updated Jun 1, 2025

A Python type checker

Python 375 41 Updated Nov 24, 2025

Protein Structure Analysis

Python 63 8 Updated Sep 30, 2025

Extra blocks for scikit-learn pipelines.

Python 1,372 121 Updated Nov 12, 2025

Contrastive PCA

Jupyter Notebook 229 54 Updated Oct 7, 2025

A high-performance BigWig and BigBed library in Rust

Rust 107 7 Updated Oct 21, 2025

Python package built to ease deep learning on graph, on top of existing DL frameworks.

Python 14,152 3,057 Updated Jul 31, 2025
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