Builds lists of Taxonomy Identifiers based on the NCBI Taxonomy Database

CUBI ISA-Tab templates

Verty short course on evolutionary game theory

A single cell transcriptomics pipeline for QC, integration and making the data presentable

An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)

Scripts and data from "Towards a global investigation of transcriptomic signatures through co-expression networks and pathway knowledge for the identification of disease mechanisms"

This repository contains the code for reproducing all the results and figures from the preprint "Isoform specificity in the mouse primary motor cortex".

This is the source of my website

This is the development home of the Snakemake wrapper repository, see

Association of e-cigarette characteristics and cigarettes in youth

List of software packages for multi-omics analysis

R package for the integrated visualisation of functional enrichment and expression data.

for visualisation of genome features

scikit-learn: machine learning in Python

A collaboratively written review paper on deep learning, genomics, and precision medicine

K-mer Motif Multinomial Mixtures

GO enrichment with python -- pandas meets networkx

Minimal and clean examples of machine learning algorithms

Code for a workshop on statistical interference using computational methods in Python.

Biological Plasmid Visualization Component using AngularJS