Making Protein folding accessible to all!

BiotrAIn course: specialised training is designed for students, researchers, and professionals in biological sciences from Latin America who are interested in leveraging Artificial Intelligence (AI…

An R package for the analysis and interpretation of cell migration tracks.

computer vision models for single-cell phenotyping

Tidy Plots for Scientific Papers

Teaching materials for the applied machine learning course at Cornell Tech (online edition)

repo for training materials

Segment Anything for Microscopy

Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy

A python based GUI to annotate images and save annotations as COCO style JSON format.

SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.

Measure distances between subcellular structures in 3D fluorescence microscopy data using the SubcellularDistribution pipeline

Repositorio con recursos de Neurociencia Cognitiva y computacional con amplitud temática.

Parte del soporte de construcción del libro "Python en Ámbitos Científicos" de Facundo Batista y Manuel Carlevaro.

MATLAB-based electrophysiological feature extraction toolkit

21 Lessons, Get Started Building with Generative AI

LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.

My GitHub profile

Analysis of TrackMate XML outputs in R

Unix, R and python tools for genomics and data science

Jupyter Notebooks for the Image Data Resource

StarDist - Object Detection with Star-convex Shapes

SplineDist: Automated Cell Segmentation with Spline Curves

ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy

An easy to use, image analysis software package that enables rapid exploration and interpretation of microscopy data.

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities