R package to analyse electrophysiology data acquired by Neuromatic / Igor Pro

R package that extends ggplot2

API providing access to papers and authors scraped from biorxiv.org

A python library for Ca imaging data analysis.

Jupyter Notebook for plotting single-cell data from Lin et al. 2018

matlab script to trace fluorescent particles in kymograph

ImageJ macro for analyzing fluorescence lifetime images and CellProfiler pipeline for multi-channel colocalization analysis

Splitting image to radial and non-radial components ImageJ macro

scripts to track nuclei over time and measure mean intensity fluorescence levels

Open Microscopy Environment inteGrated Analysis (OMEGA) is a cross-platform data management, analysis and visualization system, for particle tracking data with particular emphasis on results from v…

kinesin-3_guedes-dias_2018

Analysis package for the paper Haley, Hampton, and Marder (2018)

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

A MATLAB class for Mean Square Displacement analysis.

Complete Matlab pipeline for large scale calcium imaging data analysis

The https://freeCodeCamp.org open source codebase and curriculum. Learn to code for free together with millions of people.

Partition nuclear and cytoplasmic compartments within a cellular ROI for measurement.

BoutonAnalyzer is software for detection and tracking of structural changes in en passant boutons in time-lapse light-microscopy stacks of images, developed by the Neurogeometry lab.

Library for diffusion trajectory analysis