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snp-dists Public
Forked from tseemann/snp-distsPairwise SNP distance matrix from a FASTA sequence alignment
C GNU General Public License v3.0 UpdatedDec 31, 2025 -
hts-specs Public
Forked from samtools/hts-specsSpecifications of SAM/BAM and related high-throughput sequencing file formats
TeX UpdatedAug 12, 2025 -
libdna Public
♥ Essential Functions for DNA Manipulation
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cooler Public
Forked from open2c/coolerA cool place to store your Hi-C
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dungeon-sheets Public
Forked from canismarko/dungeon-sheetsA tool to create character sheets and GM session notes for Dungeons and Dragons fifth edition (D&D 5e).
Python GNU General Public License v3.0 UpdatedFeb 7, 2025 -
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htslib Public
Forked from samtools/htslibC library for high-throughput sequencing data formats
C Other UpdatedJun 21, 2024 -
bedtools2 Public
Forked from arq5x/bedtools2bedtools - the swiss army knife for genome arithmetic
C MIT License UpdatedJun 14, 2024 -
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biozsh Public
the z in bioinformatics
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zsh-completions Public
Forked from zsh-users/zsh-completionsAdditional completion definitions for Zsh.
Shell Other UpdatedSep 12, 2020 -
seqan3 Public
Forked from seqan/seqan3The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
C++ Other UpdatedJul 6, 2020 -
pfasta Public
A Pedantic FASTA Parser and Tool Set
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mugsy Public
Mugsy - multiple whole genome alignment tool
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sourmash Public
Forked from sourmash-bio/sourmashCompute and compare MinHash signatures for DNA data sets.
Python Other UpdatedJan 26, 2020 -
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Mash Public
Forked from marbl/MashFast genome and metagenome distance estimation using MinHash
C++ Other UpdatedDec 13, 2019 -
co-phylog Public
Forked from yhg926/co-phylogCo-phylog: an assembly-free phylogenomic approach for closely related organisms
C GNU General Public License v3.0 UpdatedNov 4, 2019 -
despacer Public
Forked from lemire/despacerC library to remove white space from strings as fast as possible
C BSD 3-Clause "New" or "Revised" License UpdatedJul 29, 2019 -
meson Public
Forked from mesonbuild/mesonThe Meson Build System
Python Apache License 2.0 UpdatedMar 14, 2019 -
geometree Public
Compute distances between phylogenetic trees
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spaced-dna Public
The Spaced Words approach to alignment-free sequence comparison
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templates Public
Forked from EvolBioInf/templatesPrograms for generating code templates
C UpdatedJan 15, 2019 -
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