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[FIX] pandas warning about use of keyword arguments #645

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Merged
merged 3 commits into from
Aug 5, 2021
Merged

[FIX] pandas warning about use of keyword arguments #645

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f880658
Fix `pandas` warning mandating keyword arguments
HippocampusGirl Jul 29, 2021
8e8b138
Fix `ImportError` during unit tests bump `scikit-learn`
HippocampusGirl Aug 5, 2021
3a3d837
Pin `scikit-learn` and `pandas` to specific versions
HippocampusGirl Aug 5, 2021
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4 changes: 2 additions & 2 deletions Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -123,9 +123,9 @@ RUN conda install -y python=3.7.1 \
mkl-service \
numpy=1.19 \
scipy=1.5 \
scikit-learn=0.19 \
scikit-learn=0.21 \
matplotlib=2.2.2 \
pandas=0.23.4 \
pandas=0.24 \
libxml2=2.9.8 \
libxslt=1.1.32 \
graphviz=2.40.1 \
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2 changes: 1 addition & 1 deletion niworkflows/interfaces/utils.py
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Expand Up @@ -955,7 +955,7 @@ def less_breakable(a_string):

drop_columns = drop_columns or []
additional_metadata = additional_metadata or {}
tsv_data = pd.read_csv(in_tsv, "\t")
tsv_data = pd.read_csv(in_tsv, sep="\t")
for k, v in additional_metadata.items():
tsv_data[k] = [v] * len(tsv_data.index)
for col in drop_columns:
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