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Pull requests: nf-core/tools

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Pull requests list

General: add pytest for get_wf_files
#3725 opened Aug 26, 2025 by mirpedrol Loading… 3.6.0
7
Patch patch command
#3714 opened Aug 15, 2025 by ErikDanielsson Loading…
2 of 4 tasks
@ErikDanielsson
5
TEMPLATE - add trainling slash for pipelines_testdata_base_path
#3701 opened Aug 5, 2025 by maxulysse Loading…
4 tasks
3
Lint for version captures in modules
#3676 opened Jul 11, 2025 by edmundmiller Loading…
4 tasks
@edmundmiller
27
Fix collectFile cache issue causing software version inconsistencies
#3654 opened Jul 2, 2025 by ewels • Draft
2 of 4 tasks
1
@ewels
11
linting: fix type error when linting modules.json
#3611 opened Jun 11, 2025 by mashehu Loading…
1
Document ext.args in meta yml
#3451 opened Feb 12, 2025 by awgymer Loading…
4 tasks
1
13
create template GENERATE_DOWNSTREAM_SAMPLESHEETS for tools
#3261 opened Oct 29, 2024 by Joon-Klaps • Draft
4 tasks
3.6.0
11
Create pre-commit hooks
#3141 opened Aug 26, 2024 by edmundmiller Loading…
@edmundmiller
7
Adopt pyproject.toml
#3139 opened Aug 26, 2024 by edmundmiller • Draft
@edmundmiller
3
Support version topic channels
#3093 opened Aug 1, 2024 by edmundmiller Loading…
4 tasks
@edmundmiller
5
fix the nested list bug that makes email not be delivered
#3081 opened Jul 25, 2024 by HaidYi Loading…
2 of 4 tasks
12
Plugin to view .nextflow.log files using toolong WIP Work in progress
#2895 opened Mar 22, 2024 by ewels • Draft
2 of 4 tasks
3
Modules: Have component_files_identical check for new optional files in modules
#2816 opened Feb 29, 2024 by asp8200 Loading…
4 tasks
20
Add config contacts
#2800 opened Feb 27, 2024 by edmundmiller Loading…
@edmundmiller
4
Add a multi-cloud test profile
#2544 opened Nov 28, 2023 by abhi18av • Draft
2 of 4 tasks
@abhi18av
23
Add nf-prov
#2455 opened Sep 29, 2023 by maxulysse Loading…
4 tasks
13
nf-core modules list works on pipeline repos as well as module repos
#2418 opened Sep 11, 2023 by adamrtalbot Loading…
2 of 4 tasks
4
Use more pytest fixtures in modules tests WIP Work in progress
#2226 opened Mar 29, 2023 by fabianegli Loading…
1 of 4 tasks
12
[create] Option to set branch names command line tools Anything to do with the cli interfaces
#1961 opened Oct 20, 2022 by fabianegli Loading…
2 of 4 tasks
8
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