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Showing results

LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.

TeX 19 2 Updated May 27, 2024

A program for divvying or partially filtering multiple sequence alignments

C++ 27 Updated Oct 14, 2019

GraftM - Rapid community profiles from metagenomes

Python 47 16 Updated Nov 6, 2025

🚀 A sequencing simulator

Python 214 37 Updated Jun 24, 2025

A DSL for data-driven computational pipelines

Groovy 3,221 748 Updated Nov 27, 2025

Massively parallel phylogenetic placement of genetic sequences

C++ 86 7 Updated Aug 23, 2022

Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

C 295 67 Updated Apr 25, 2025

🎄Visualization and annotation of phylogenetic trees

R 899 180 Updated Oct 30, 2025

A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

C++ 239 47 Updated Nov 26, 2025