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Showing results

Implement a reasoning LLM in PyTorch from scratch, step by step

Python 1,777 212 Updated Oct 21, 2025
Jupyter Notebook 1 Updated May 11, 2025

Meta-analysis of drug target evidence in single-cell data

Jupyter Notebook 15 3 Updated Oct 22, 2024

A full-stack local deep research application built with LangGraph, supporting multiple LLM providers and search APIs. Powered by FastAPI + LangGraph backend and Next.js 15 + React 19 frontend, deli…

Python 8 Updated Jun 15, 2025

An agent using Langgraph and Agent Inbox to close stale issues

Python 51 13 Updated Sep 12, 2025

Chat2Graph: Graph Native Agentic System.

Python 359 42 Updated Oct 15, 2025

Mach-1.5 model training framework built on Savanna, supporting multi-species, hybrid convolutional architectures with preprocessed RefSeq data.

Python 1 Updated Jul 15, 2025

大模型智能体Agent中文教程,博客代码仓库

Python 45 6 Updated Oct 11, 2025

Code for "SToFM: a Multi-scale Foundation Model for Spatial Transcriptomics".

Python 27 5 Updated Sep 2, 2025

The official Python SDK for Model Context Protocol servers and clients

Python 19,491 2,649 Updated Oct 20, 2025

An Open Implementation of Data Science AI Agent

Python 2 1 Updated Jun 10, 2025

A chatbot implementation compatible with MCP (terminal / streamlit supported)

Python 210 47 Updated Jul 30, 2025

Code & Train Qwen3 From Scratch

Python 5 2 Updated Aug 9, 2025
Jupyter Notebook 5,707 1,525 Updated Jun 26, 2025

A foundation model framework for analyzing multiplexed tissue imaging data across molecular, cellular and tissue scales enabling clinical diagnostics, biological discovery and patient case retrieval.

Python 38 5 Updated Feb 17, 2025

Tuning LLMs with no tears💦; Sample Design Engineering (SDE) for more efficient downstream-tuning.

HTML 1,016 101 Updated Apr 27, 2024

LLM implementation one matrix multiplication at a time

Jupyter Notebook 12 5 Updated Aug 8, 2024

an exploration of deepseek

Python 1 Updated Feb 21, 2025

Reproduction of the complete process of DeepSeek-R1 on small-scale models, including Pre-training, SFT, and RL.

Python 28 2 Updated Mar 11, 2025

BioNeMo Framework: For building and adapting AI models in drug discovery at scale

Jupyter Notebook 548 88 Updated Oct 21, 2025

Course to get into Large Language Models (LLMs) with roadmaps and Colab notebooks.

65,657 7,369 Updated Jun 4, 2025
Python 1 Updated Mar 12, 2025

BERT for spatial transcriptomics

Python 6 Updated Dec 31, 2024
Jupyter Notebook 5 4 Updated Jun 14, 2025

AI4S Cup -LLM挑战赛-大模型提取“基因-疾病-药物”知识图谱-解决方案-Rank4

Python 6 2 Updated May 8, 2024

Self-contained, minimalistic implementation of diffusion models with Pytorch.

Python 1,109 142 Updated Jun 28, 2022

Gemma open-weight LLM library, from Google DeepMind

Python 3,774 561 Updated Oct 17, 2025
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