Execute SQL against structured text like CSV or TSV

A suite of utilities for converting to and working with CSV, the king of tabular file formats.

q - Run SQL directly on delimited files and multi-file sqlite databases

An interactive TLS-capable intercepting HTTP proxy for penetration testers and software developers.

a modified version of FunSeq2 using new data context

This is ROCgdb, the ROCm source-level debugger for Linux, based on GDB, the GNU source-level debugger.

A free, open source, multi-platform SQLite database manager.

Python API for Genomic Data Commons

TCGA-Assembler 2

FInding REliable Variants without ArTifacts

🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

R package for DNA methylation analysis

A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.

Impute DNA methylation from WGBS data.

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

Gene.iobio vue

DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring very little computational effort and memory usage

Awesome Artificial Intelligence, Machine Learning and Deep Learning as we learn it. Study notes and a curated list of awesome resources of such topics.

A curated list of awesome Pycharm plugins (feel free to submit PRs!)

Fast, correct Python JSON library supporting dataclasses, datetimes, and numpy

A JSON5 serializer and parser library for Python 3 written in Cython.

Automate boring tasks using Python scripts generated using ChatGPT

VS Code Snippets Jetbrains Plugin

Unofficial Microsoft Teams for Linux client

A Video Surveillance OS For Single-board Computers

bottle.py is a fast and simple micro-framework for python web-applications.