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McDonnell Genome Institute
- St. Louis
- @zlskidmore
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zlskidmore.github.io Public
Personal website and blog
SCSS Creative Commons Attribution 4.0 International UpdatedDec 27, 2025 -
bio-containers Public
A collection of docker files for bioinformatics tools
Dockerfile UpdatedNov 22, 2025 -
sc-epigenie Public
Forked from stjude-dnb-binfcore/sc-epigenieAutomated and containerized workflow for 10X single cell and single nuclei ATAC (sc/snATAC) data.
R BSD 2-Clause "Simplified" License UpdatedOct 3, 2025 -
CAIRO5_Public Public
Forked from delfidiagnostics/CAIRO5_PublicCAIRO5 Analysis scripts and data
R UpdatedMay 16, 2024 -
immuno_gcp_wdl_compute1 Public
Forked from wustl-oncology/immuno_gcp_wdl_compute1Tutorial to run immuno.wdl on Google Cloud
MIT License UpdatedMay 10, 2022 -
analysis-wdls Public
Forked from wustl-oncology/analysis-wdlsEarly stages of converting genome/analysis-workflows from CWL to WDL
WDL UpdatedMay 10, 2022 -
cloud-workflows Public
Forked from wustl-oncology/cloud-workflowsInfrastructure and tooling required to get genomic workflows running in the cloud
Python UpdatedMay 6, 2022 -
gUtils Public
Forked from mskilab-org/gUtilsUtility functions to extend and optimize GenomicRanges functionality.
R GNU General Public License v2.0 UpdatedDec 7, 2021 -
fragCounter Public
Forked from mskilab-org/fragCounterGC and mappability corrected fragment coverage for paired end whole genome sequencing
R MIT License UpdatedDec 6, 2021 -
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fantasy-football-rulebook Public
Forked from GenomicMedLab/fantasy-football-rulebookRulebook for the annual Griffith / Wagner Labs Fantasy Football League
Creative Commons Zero v1.0 Universal UpdatedJun 3, 2021 -
analysis-workflows Public
Forked from genome/analysis-workflowsMGI's Analysis Workflows and Pipelines managed by the BGA group.
Common Workflow Language MIT License UpdatedApr 1, 2021 -
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docker-ubuntu-zsh Public
Docker image instructions for a Base ubuntu image with z-shell and some custom configs
Dockerfile UpdatedApr 16, 2020 -
docker-STAR-Fusion Public
Docker image instructions for STAR-Fusion
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clonevol Public
Forked from hdng/clonevolInferring and visualizing clonal evolution in multi-sample cancer sequencing
R GNU General Public License v3.0 UpdatedNov 9, 2019 -
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docker-perl Public
Docker image instructions for perl and relevant modules
Dockerfile UpdatedOct 9, 2019 -
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bioinformatic-workflows Public
Forked from griffithlab/bioinformatic-workflowsCWL workflows for bioinformatic analysis
Common Workflow Language UpdatedAug 8, 2019 -
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