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Code complementing our manuscript on the prediction of chemical reaction yields (https://iopscience.iop.org/article/10.1088/2632-2153/abc81d) and data augmentation strategies (https://doi.org/10.26…

Jupyter Notebook 131 27 Updated Aug 5, 2022

Implement a reasoning LLM in PyTorch from scratch, step by step

Jupyter Notebook 2,073 271 Updated Nov 24, 2025

LillyMol Public Code

C++ 122 41 Updated Aug 28, 2025

Build memory-native AI agents with Memory OS — an open-source framework for long-term memory, retrieval, and adaptive learning in large language models. Agent Memory | Memory System | Memory Manage…

Python 3,118 279 Updated Nov 24, 2025

Public repository for Skills

Python 18,181 1,680 Updated Nov 17, 2025

CheMeleon Descriptor-based Foundation Model

Jupyter Notebook 95 10 Updated Sep 17, 2025

The official code for PDVN: Retrosynthetic Planning with Dual Value Networks (ICML 2023)

Jupyter Notebook 29 2 Updated Apr 21, 2024
Jupyter Notebook 4 Updated Oct 27, 2025
Python 36 7 Updated Aug 4, 2023

Python package for graph neural networks in chemistry and biology

Python 782 162 Updated Nov 1, 2023

A community-curated list of resources related to self-driving labs which combine hardware automation and artificial intelligence to accelerate scientific discovery.

TeX 191 30 Updated Oct 17, 2025

Learning Graph Models for Retrosynthesis Prediction (NeurIPS 2021)

Python 55 14 Updated Jun 29, 2023
Python 12 2 Updated Feb 10, 2025
Python 11 Updated Aug 11, 2025

User friendly and accurate binder design pipeline

Python 919 210 Updated Aug 12, 2025

ReTReK: data-driven ReTrosynthesis planning application using Retrosynthesis Knowledge

Pawn 35 12 Updated Jul 12, 2023
Python 10 1 Updated Oct 9, 2024
Python 45 16 Updated May 12, 2020

Message Passing Neural Networks for Molecule Property Prediction

Python 2,179 700 Updated Nov 11, 2025

A curated collection of papers, datasets, and resources on Scientific Datasets and Large Language Models (LLMs)

408 29 Updated Oct 3, 2025
Jupyter Notebook 1 1 Updated Aug 18, 2025

Modern Hopfield Network (MHN) for template relevance prediction

Jupyter Notebook 47 11 Updated Sep 4, 2023

Open source electronic lab notebook (ELN) that helps you manage your laboratory work and stores all your experimental data in one place.

Ruby 288 109 Updated Nov 24, 2025

Indigo ELN - Open Source Chemistry Electronic Lab Notebook

Java 45 24 Updated Nov 24, 2025

Contexts Optical Compression

Python 20,820 1,823 Updated Oct 25, 2025

Genome modeling and design across all domains of life

Jupyter Notebook 3,213 369 Updated Sep 17, 2025

A Genomic Foundation Model

Jupyter Notebook 102 4 Updated Nov 24, 2025
Python 73 18 Updated May 21, 2024
Python 9 1 Updated Aug 25, 2023
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