Distance-based Phylogenetic Placer

Easily build an UShER tree of genomes for any virus in RefSeq/GenBank

Wastewater-Based Epidemiology using Phylogenetic Placements

High throughput tool for tall and wide multiple sequence alignment.

HLS-based framework to accelerate the implementation of 2-D DP kernels on FPGA

Pangenome Mutation-Annotated Networks

Tool for fully-automated inference of species trees from raw genome assemblies

Lecture on viral phylodynamics

SARS-CoV-2 Recombination Viewer and Tracker

A collection of extensions for Vitis and Intel FPGA OpenCL to improve developer quality of life.

Depth-weighted De-Mixing

OpenROAD's unified application implementing an RTL-to-GDS Flow. Documentation at https://openroad.readthedocs.io/en/latest/

Open source process design kit for usage with SkyWater Technology Foundry's 130nm node.

The CORE-V CVA6 is a highly configurable, 6-stage RISC-V core for both application and embedded applications. Application class configurations are capable of booting Linux.

Ibex is a small 32 bit RISC-V CPU core, previously known as zero-riscy.

RTL implementation of Flex-DPE.