LLM graph-RAG SQL generator for large databases with poor documentation

Controlling up to three chains of 64x64, 32x32, 16x32 or similar RGB LED displays using Raspberry Pi GPIO

A gallery that showcases on-device ML/GenAI use cases and allows people to try and use models locally.

secondary analysis pipelines parallelized with apache spark

Genotype Representation Graph Library

A powerful, recursive URL-smart web scraping tool designed to efficiently collect and organize content from websites. This tool is perfect for developers, researchers, and data enthusiasts who need…

Autonomous coding agent right in your IDE, capable of creating/editing files, executing commands, using the browser, and more with your permission every step of the way.

This repository showcases various advanced techniques for Retrieval-Augmented Generation (RAG) systems. RAG systems combine information retrieval with generative models to provide accurate and cont…

Lightweight library for scraping web-sites with LLMs

Chakravarti Lab's genomic analysis work, all rights reserved.

Fast, Accurate and Memory-Efficient Principal Component Analysis For Tera-scale Dataset

Call variants from gVCF file.

Low Coverage Calling of Genotypes

Resource library for getting started with deep learning work using electrocardiograms

software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis

gapped k-mer-SVM quality check (gkmQC): Quality assessment and refinement of the chromatin accessibility data

Tutorial for running the PredictDB pipeline with GEUVADIS data

Some code for processing and analysing UK Biobank cardiac MR images.

A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

Publication quality NGS track plotting

Deep probabilistic analysis of single-cell and spatial omics data

Examples using Clustergrammer2 to explore high-dimensional datasets.

R kernel for Jupyter