A repository of USPSA Stage designs

A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. PROST uses colab AlhpaFold2 for the prediction of pdb strutu…

Pipeline and scripts for maize NAM line annotation and analysis

RNA-Seq-based analysis of the spatio-temporal dynamics of gene expression in Maize Silks.

Keting's R scripts presented in the dissertation project

Mummer alignment tool

Detailed bioinformatics scripts and methods used in the NAM genome paper.

An R framework for phylostratigraphy

Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.

R Package to Estimate Variable Recombination Rates using Population Genetic Data

Estimate recombination rates from population genetic data

My published program for estimating the population recombination rate.

DensityMap is perl tool for the visualization of features density along chromosomes

Synteny and Rearrangement Identifier

A fast way to call copy number variants from SNP callsets