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Posit Cheat Sheets - Can also be found at https://posit.co/resources/cheatsheets/.

TeX 6,225 1,932 Updated Sep 24, 2025

RNA-seq aligner

C 2,078 537 Updated Mar 18, 2025

Counting Reads for Intronic and Exonic Segments

R 10 1 Updated Sep 19, 2022

Brain-related -omics data

26 6 Updated Jul 25, 2024

Links to all data science, genomics, and other notes

55 9 Updated Jun 15, 2025

A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.

200 32 Updated Jun 23, 2025

A list of scRNA-seq analysis tools

R 752 166 Updated Oct 7, 2025

scATAC-seq data analysis tools and papers

124 22 Updated Jul 1, 2025

A curated collection of currently available scATAC-seq datasets accessible through R, and exportable to other languages.

R 7 1 Updated Nov 12, 2024

Github Pages template based upon HTML and Markdown for personal, portfolio-based websites.

HTML 15,830 3,806 Updated Nov 3, 2025
JavaScript 2 Updated Nov 24, 2018

Collections of library structure and sequence of popular single cell genomic methods

HTML 485 104 Updated May 19, 2025

R package with commonly used functions by the Jaffe lab

R 7 3 Updated Dec 12, 2024
Python 25 4 Updated May 15, 2019

10x Genomics Linked-Read Diploid De Novo Assembler

C++ 65 25 Updated Dec 6, 2018
Python 274 153 Updated Nov 28, 2021

Codes for Schizophrenia CellType project

HTML 1 1 Updated Feb 13, 2019
Perl 4 3 Updated Dec 20, 2018

Scripts used for analysis of data in paper, 'Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric disease heritability'.

R 9 6 Updated Oct 23, 2018

Codes for Primate CellType project

R 1 3 Updated Nov 22, 2019

WGBS/NOMe-seq Data Processing & Differential Methylation Analysis

Python 146 51 Updated May 20, 2023

Find causal cell-types underlying complex trait genetics

R 91 32 Updated Feb 25, 2025

In this project we will build a web portal for our GoT data analysis and visualization system. The website will integrate all the apps created in projects B-D with the help of the integration team …

JavaScript 10 8 Updated Apr 3, 2019

【编程随想】整理的《太子党关系网络》,专门揭露赵国的权贵

Python 13,876 2,758 Updated Aug 1, 2021

V-SVA: An R Shiny application for detecting and annotating hidden sources of variation in single cell RNA-seq data

R 7 3 Updated Mar 3, 2020

手把手教你使用 EndNote X9/NoteExpress

1,201 225 Updated Nov 23, 2020

Source code of FUMA GWAS web application

Blade 60 24 Updated Nov 17, 2023

handle mysql in python

Python 6 1 Updated Oct 19, 2018
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