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AIHawk aims to easy job hunt process by automating the job application process. Utilizing artificial intelligence, it enables users to apply for multiple jobs in a tailored way.
A collection of publications on comparison of high-throughput sequencing technologies.
Clean, responsive, single-page Hugo website theme.
A personal search engine: Create a searchable library from your personal documents, interests, and more!
Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
Better privacy without special software
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details.
A personal knowledge management and sharing system for VSCode
Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"
This repository contains the code for reproducing all the results and figures from the preprint "Isoform specificity in the mouse primary motor cortex".
Simulate genealogical trees and genomic sequence data using population genetic models
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…
Plugin for PyCharm / IntelliJ IDEA Platform IDEs which adds support for Snakemake language.
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
Tools (written in C using htslib) for manipulating next-generation sequencing data
C library for high-throughput sequencing data formats
Simple DP implementation of Needleman-Wunsch for generating CIGAR strings for sequence alignments.
De novo genome assembly and multisample variant calling