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1. g-cyto-viewer g-cyto-viewer Public

   Web tool to visualize SCC datasets

   Vue 1

2. asapseq-hiv-art asapseq-hiv-art Public

   code for analysis and figures of viral scASAPseq during HIV infection

   R 2 2

3. geneCutterParser geneCutterParser Public

   Parses results from HIV LANL Database's Gene Cutter tool to get coordinates

   Python 1

4. hiv-haystack hiv-haystack Public

   find integration sites and collate proviral reads from scATAC data

   Python 1 1

5. betts-lab/scc-proc betts-lab/scc-proc Public

   Upstream processing for SCC

   Python 1

6. viral-asapseq-snakemake viral-asapseq-snakemake Public

   snakemake pipeline for running viral scASAPseq

   Python 4 1