Examples and guides for using the OpenAI API

Python implementation of Milo for differential abundance testing on KNN graph

Additional statistics sessions

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

SpaceJam is an analysis platform for performing data exploration, gene DE analysis, estimating cell type abundance and prioritising cell communication events using Nanostring GeoMx data. We use pro…

Single cell transcriptomic data from Tasic, et al. (2016)

Analysis of single cell RNA-seq data course

Code snippets, useful one-liners and related trivia.

fast javascript scatter plot library

Fast reading of delimited files

R Package for 2D and 3D mapping and data visualization

A curated list of awesome Machine Learning frameworks, libraries and software.

The most cited deep learning papers

Firefox for iOS

A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments