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An open, extensible Python framework for GPU-accelerated alchemical free energy calculations.

Python 190 72 Updated Jul 6, 2023

Vim-fork focused on extensibility and usability

Vim Script 94,537 6,431 Updated Nov 25, 2025

NumPy aware dynamic Python compiler using LLVM

Python 10,747 1,207 Updated Nov 25, 2025

NumPy & SciPy for GPU

Python 10,640 974 Updated Nov 25, 2025

awesome open list of pointers about open science for software and computational science

159 21 Updated Aug 7, 2025

Tutorial for converting NAMD psf/pdb files to CHARMM PSF/CRD (credit attributed where appropriate to the AMAZING humans who developed these scripts)

9 1 Updated Feb 2, 2025

Official repository for Spyder - The Scientific Python Development Environment

Python 9,032 1,742 Updated Nov 25, 2025

ParametrizANI - Fast, Accurate and Free Dihedral Parametrization in the Cloud with TorchANI

Jupyter Notebook 22 1 Updated Jul 28, 2025

Visual Studio Code

TypeScript 178,973 36,429 Updated Nov 26, 2025

Download market data from Yahoo! Finance's API

Python 19,980 2,914 Updated Nov 23, 2025

A Zotero plugin for syncing items and notes into Notion

TypeScript 2,978 123 Updated Nov 22, 2025

Official MPICH Repository

C 644 310 Updated Nov 25, 2025

Utilities to run on MPI.

Python 4 3 Updated Apr 27, 2023

Python-centric Cookiecutter for Molecular Computational Chemistry Packages

Python 442 92 Updated Nov 21, 2025

Zotero plugin to automatically move attachments and link them

JavaScript 1,074 20 Updated Nov 22, 2025

Python implementation of the multistate Bennett acceptance ratio (MBAR)

Python 282 94 Updated Oct 16, 2025

CHARMM and AMBER forcefields for OpenMM (with small molecule support)

Rich Text Format 335 86 Updated Nov 21, 2025

🆚 A big pack of icons (200+) for your files

JavaScript 180 59 Updated Sep 16, 2025

A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.

Python 303 86 Updated Sep 30, 2025

The personal knowledge management (PKM) tool that grows as you do!

TypeScript 7,273 297 Updated Nov 13, 2025

🙃 A delightful community-driven (with 2,400+ contributors) framework for managing your zsh configuration. Includes 300+ optional plugins (rails, git, macOS, hub, docker, homebrew, node, php, python…

Shell 182,970 26,285 Updated Nov 23, 2025

Python replica-exchange simulation facility for OpenMM.

Python 8 10 Updated Jan 22, 2015

The OpenMM Cookbook and Tutorials

Jupyter Notebook 52 12 Updated Nov 25, 2025

🍺 The missing package manager for macOS (or Linux)

Ruby 45,588 10,702 Updated Nov 24, 2025

AeroSpace is an i3-like tiling window manager for macOS

Swift 16,987 347 Updated Nov 25, 2025

💎 Soothing pastel theme for Obsidian

CSS 537 23 Updated Nov 21, 2025

📖 A collection of pure bash alternatives to external processes.

Shell 40,748 3,604 Updated Nov 28, 2023

Over 425 terminal color schemes/themes for iTerm/iTerm2. Includes ports to Terminal, Konsole, PuTTY, Xresources, XRDB, Remmina, Termite, XFCE, Tilda, FreeBSD VT, Terminator, Kitty, MobaXterm, LXTer…

Shell 26,200 6,497 Updated Nov 24, 2025

A launch point for your personal nvim configuration

Lua 28,354 41,896 Updated May 22, 2025

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

Python 47,187 19,341 Updated Nov 25, 2025
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