微舆：人人可用的多Agent舆情分析助手，打破信息茧房，还原舆情原貌，预测未来走向，辅助决策！从0实现，不依赖任何框架。

Genome modeling and design across all domains of life

A trainable PyTorch reproduction of AlphaFold 3.

Enhanced version of the FastQTL QTL mapper

benchmark of RNA-RNA interaction

Human Embryonic RNA Editome

TF MOtif Discovery from Importance SCOres

Metagene Profiling Analysis and Visualization

python utils for genomic variant (WIP)

Basic workflow for ATAC-seq analysis

drunk on perbase pileups and lua expressions

🧬 A general pipeline for data processing of 3 letter sequencing methods.

Accurate Prediction of Genome-wide RNA Secondary Structure Based on Extreme Gradient Boosting

The complete sequence of a human genome

A Tiny WebGL helper Library

A JavaScript framework for interactive 3D and 2D visualizations

The repo is to host the scripts and the results of multiple RBPs.

CLIP Tool Kit (CTK)

Small utilities for working with fastq sequence files.

Repository

CWL workflows and tools for the miRNA-Seq workflow

Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them

🍒 Cherry Studio is a desktop client that supports for multiple LLM providers.

Additional analysis on SpliceBERT

Primary RNA sequence model

Process m6A/MeRIP-seq data in a single or batch job mode

Jupyter notebook based genomic data visualization toolkit.

Feature-rich Python implementation of the tximport package for gene count estimation.

chimeric eCLIP processing pipeline

This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length …