Stars
nf-core/demo is a simple nf-core style bioinformatics pipeline for workshops and demos.
AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.
A Chrome Extension to make translating via ChatGPT seamless.
Converting genomic sequence data to tensor-valued orthogonal polynomials and projecting phenotypes onto sequence space.
Implementation of distribution mapping based transfer learning
A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.
Manuscript for k-mer based comparative transcriptomics
A tool for fast and accurate summarizing of variant calling format (VCF) files
Sample code for Channel 9 Python for Beginners course
A DSL for data-driven computational pipelines
A curated list of nextflow based pipelines
Benchmarking computational single cell ATAC-seq methods
snafees / Molecular-language-discovery-of-cell-to-cell-communication-molecules-from-RNAseq-data
Forked from NCBI-Hackathons/TraINsnafees / kmermaid
Forked from nf-core/kmermaidk-mer similarity analysis pipeline.
Quickly search, compare, and analyze genomic and metagenomic data sets.