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NPM-sample-qc Public
Forked from c-BIG/NPM-sample-qchttps://c-big.github.io/NPM-sample-qc
Python MIT License UpdatedJul 12, 2022 -
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wgs-sample-qc Public
Forked from c-BIG/wgs-sample-qcRepository to host ongoing discussions by GHIF members on developing a reference implementation for QC of WGS results
Python UpdatedJan 25, 2022 -
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bio-cwl-tools Public
Forked from common-workflow-library/bio-cwl-toolsCommon Workflow Language Apache License 2.0 UpdatedMay 17, 2020 -
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2019-0912-It-takes-a-spark Public
Forked from R-LadiesMelbourne/2019-0912-It-takes-a-sparkUpdatedSep 17, 2019 -
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mosdepth Public
Forked from brentp/mosdepthfast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
Nim MIT License UpdatedJan 24, 2019 -
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MegaQC Public
Forked from MultiQC/MegaQCWeb application to collect and visualise data across multiple MultiQC runs.
Python GNU General Public License v3.0 UpdatedOct 10, 2018 -
GATK-CaseStudy Public
GATK Variant Calling Workflow using Galaxy, CWL and Cpipe
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bcbio-nextgen Public
Forked from bcbio/bcbio-nextgenValidated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Python MIT License UpdatedJul 29, 2018 -
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2018-06-16_Introduction-to-R-workshop Public
Forked from R-LadiesMelbourne/2018-06-16_Introduction-to-R-workshopWorkshop material
UpdatedJun 16, 2018 -
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blair-walden-project Public
Forked from AllenDowney/blair-walden-projectThe Blair Walden Project: in 1845 Henry David Thoreau went to live in the woods... a year later his journal was found.
UpdatedMar 20, 2018 -
tools-iuc Public
Forked from galaxyproject/tools-iucTool Shed repositories maintained by the Intergalactic Utilities Commission
Python MIT License UpdatedJan 19, 2018 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedJan 17, 2018 -
bcbio-validation-checker Public
Forked from bcbio/bcbio-validation-checkerCompare validation outputs from bcbio against existing truth sets
Python UpdatedJul 1, 2017 -
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workflows Public
Forked from common-workflow-library/legacyCommunity maintained workflows & tools (with examples)
Makefile UpdatedNov 26, 2015 -
gvl-melbgenomics-deploy Public
Forked from supernifty/gvl-melbgenomics-deployScripts for creating flavours of Cpipe and LOVD for the GVL
1 UpdatedJun 5, 2015 -
calc Public
Forked from jordanph/calcA simple python calculator
Python BSD 3-Clause "New" or "Revised" License UpdatedDec 11, 2014 -
vcf-venn Public
Forked from Slugger70/vcf-vennA tool to compare variants contained within multiple vcf format files, to determine common and unique variants to each file. To write these variants to a new file also in vcf format.
Python UpdatedOct 4, 2013
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