This is a method to find telomeres and centromeres in plants.

Analysis of monococcum introgressions into hexaploid wheat

Methods and recipes for Plant Genome Annotation - Transposable Elements

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

The full-length Homology-based R-gene Prediction (HRP) pipeline to comprehensively identify full-length NB-LRR gene models within genome assemblies.

FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries

Population genetics notes

Genome-wide investigation of non-canonical splice sites

Genome-wide investigation of non-canonical splice sites

Improved text rendering support for ggplot2

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…