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MMseqs2: ultra fast and sensitive search and clustering suite

C 1,901 256 Updated Nov 25, 2025

Hugo documentation theme as simple as plain book

CSS 3,866 1,301 Updated Nov 18, 2025

Public repo for rbio, a biologically-informed reasoning model trained on virtual cell models as verifiers

Python 120 14 Updated Nov 24, 2025

Resource library for getting started with deep learning work using electrocardiograms

Jupyter Notebook 128 33 Updated Sep 12, 2025

State is a machine learning model that predicts cellular perturbation response across diverse contexts

Python 459 129 Updated Nov 13, 2025

Comprehensive suite for evaluating perturbation prediction models

Python 110 38 Updated Nov 11, 2025
Python 14 1 Updated May 22, 2025

[ICML 2025] Fast and Low-Cost Genomic Foundation Models via Outlier Removal.

Python 17 2 Updated Jun 19, 2025

This repository contains the implementation of **Alternators**, a novel family of generative models for time-dependent data.

Python 35 2 Updated Jun 6, 2025

RiboNN: predicting translation efficiencies from mRNA sequences

Python 42 12 Updated Oct 3, 2025

A fast, clean, responsive Hugo theme.

HTML 12,713 3,275 Updated Oct 26, 2025

Serif is a multi page business theme for Jekyll.

SCSS 830 898 Updated Jun 29, 2024

A complete toolkit for quantitative research and development of options trading strategies.

Python 19 2 Updated Jun 5, 2025

Applied Computational Genomics Course at UU: Spring 2020

HTML 1,066 238 Updated Apr 5, 2024

Pretraining infrastructure for multi-hybrid AI model architectures

Python 194 21 Updated Jul 16, 2025

Genome modeling and design across all domains of life

Jupyter Notebook 3,221 371 Updated Sep 17, 2025

Arc Virtual Cell Atlas

Jupyter Notebook 457 42 Updated May 6, 2025

Machine Learning in Drug Discovery Resources 2024

244 26 Updated Apr 27, 2025

A DSL for data-driven computational pipelines

Groovy 3,220 748 Updated Nov 27, 2025
Python 3 Updated Feb 17, 2025
Jupyter Notebook 1,387 296 Updated Nov 12, 2025

Codebase for training the SubCell models

Python 16 3 Updated Nov 24, 2025
R 1 2 Updated Dec 5, 2018

Best Papers of Top Venues like CVPR, NeurIPS, ICLR, ICML, ICCV, ECCV, ...

229 12 Updated Oct 31, 2025

Interactive roadmaps, guides and other educational content to help developers grow in their careers.

TypeScript 344,501 43,451 Updated Nov 27, 2025

LLM101n: Let's build a Storyteller

35,698 1,943 Updated Aug 1, 2024

A beautiful, simple, clean, and responsive Jekyll theme for academics

HTML 14,569 12,527 Updated Nov 26, 2025

Deep learning embedding for nucleotide sequences

Python 19 3 Updated Mar 26, 2025

Grok open release

Python 50,579 8,379 Updated Aug 30, 2024

Minimal, clean code for the Byte Pair Encoding (BPE) algorithm commonly used in LLM tokenization.

Python 10,183 981 Updated Jul 1, 2024
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