Stars
No fortress, purely open ground. OpenManus is Coming.
PBSIM3: a simulator for all types of PacBio and ONT long reads
Code for the empty droplet and cell detection project from the HCA Hackathon.
📮 A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study
A variational framework for inferring population structure from SNP genotype data.
Python library to handle Gene Ontology (GO) terms
Fast genome-wide functional annotation through orthology assignment
Full-Length Alternative Isoform analysis of RNA
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
A tool for somatic structural variant calling using long reads
Various algorithms for analysing genomics data
Tumor-normal variant calling workflow using HiFi reads
Nextflow pipeline to analyze PacBio HiFi full-length 16S data
R's data.table package extends data.frame:
ggplot2: elegant graphics for data analysis
Posit Cheat Sheets - Can also be found at https://posit.co/resources/cheatsheets/.
A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files
DPGT is a distributed population genetics analysis tool which enabled joint calling on millions of WGS(whole genome sequencing) samples.