Introduction to Machine Learning Systems

MethPhaser: methylation-based haplotype phasing of human genomes

An extremely fast Python package and project manager, written in Rust.

A breakthrough bioinformatics tool TRcaller in Java: the fastest and most accurate STR/SSR/TR genotyping tool

Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads

Read-based phasing of genomic variants, also called haplotype assembly

Manage many git repos with sanity 从容管理多个git库

systematic explanation of attribution-based mechanisms for regulatory genomics

FreeRDP is a free remote desktop protocol library and clients

Run Windows apps on 🐧 Linux with ✨ seamless integration

👻 Ghostty is a fast, feature-rich, and cross-platform terminal emulator that uses platform-native UI and GPU acceleration.

Open source repository for Kite, news app by Kagi.

Python package with helper tools for the nf-core community.

A DSL for data-driven computational pipelines

On-demand containers provisioning service

Publish your Markdown Files to Confluence

Structural variation caller using third generation sequencing

An transformer based LLM. Written completely in Rust

NEAT read simulation tools

CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)

PBSIM3: a simulator for all types of PacBio and ONT long reads

Whole Genome Simulator for Next-Generation Sequencing

This is an updated mirror of the original PacBio Read Simulator

Machine Learning-based tool to assess the functional relevance of splice isoforms.

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

Terminal bandwidth utilization tool

A terminal workspace with batteries included