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umap_pytorch Public
Forked from elyxlz/umap_pytorchPytorch port for Parametric Umap
Python MIT License UpdatedJul 2, 2025 -
braindance Public
Forked from braingeneers/braindanceMaking neural stimulation easier
Python GNU General Public License v3.0 UpdatedMay 28, 2025 -
cellBrowser Public
Forked from ucscGenomeBrowser/cellBrowserPython pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org
JavaScript GNU General Public License v3.0 UpdatedMar 1, 2025 -
tabnet Public
Forked from dreamquark-ai/tabnetPyTorch implementation of TabNet paper : https://arxiv.org/pdf/1908.07442.pdf
Python MIT License UpdatedFeb 22, 2025 -
SIMS Public
Forked from braingeneers/SIMSSIMS: Scalable, Interpretable Models for Cell Annotation of large scale single-cell RNA-seq data
Python MIT License UpdatedFeb 4, 2025 -
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fhir-stats Public
Dynamically parse multiple FHIR bundles and extract stats
TypeScript Apache License 2.0 UpdatedAug 22, 2022 -
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jupyter Public
Tooling to run jupyter on a shared server and scale via k8s
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kubernetes Public
Various snippets and tooling to use a kubernetes cluster
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pancan-gtex Public
Ingest, classify and explain pancan-gtex via keras and tensorflow
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pubMunch Public
Forked from maximilianh/pubMunchvarious tools to download, convert and process the full text of scientific articles
Python UpdatedMar 27, 2019 -
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tumornormal Public
Classifying TCGA+TARGET+GTEX Gene Expression Data
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tabula-muris Public
Ingest, classify and explain single cell RNA-Seq mouse data
Jupyter Notebook UpdatedNov 21, 2018 -
brca-exchange Public
Forked from BRCAChallenge/brca-exchangeOverall management and deployment of the BRCA Exchange web portal and pipeline scripts
JavaScript UpdatedAug 27, 2018 -
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cgtd Public
Forked from cancergenetrust/cgtdDecentralized distributed database of genomic and clinical data.
Python Apache License 2.0 UpdatedJun 14, 2018 -
wisdom Public
Snippets for Athena/Wisdom analysis tooling
Jupyter Notebook Apache License 2.0 UpdatedApr 18, 2018 -
search-jupyter Public
Search un-structured and semi-structured/tagged data in jupyter notebooks
JavaScript Apache License 2.0 UpdatedApr 18, 2018 -
Implementation of Graph Convolutional Networks in TensorFlow
Python MIT License UpdatedDec 20, 2017 -
kluster Public
Experiments in kmer clustering
Jupyter Notebook Apache License 2.0 UpdatedNov 11, 2017 -
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curate-cgt Public
Curate CGT submission data into canonical formats
Python Apache License 2.0 UpdatedFeb 23, 2017 -
dtmp Public
Template Continious Integration Flask Project
Python Apache License 2.0 UpdatedFeb 17, 2017 -
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icgc-cgt Public
Scripts to ingest icgc public data and submit to a demo set of CGT servers
Python UpdatedDec 1, 2016 -
caffe Public
Forked from BVLC/caffeCaffe: a Fast framework for neural networks
C++ BSD 2-Clause "Simplified" License UpdatedMay 29, 2014
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