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GlobalNetworkMalaspinaHotmix Public
Forked from InaMariaDeutschmann/GlobalNetworkMalaspinaHotmixData and code to "Disentangling marine microbial networks across space"
Jupyter Notebook GNU General Public License v3.0 UpdatedOct 13, 2023 -
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BBMO.krabberod.etal Public
Data from the Blanes Bay Microbial Observatory (BBMO) (http://bbmo.icm.csic.es)
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BIO9905MERG1_V21 Public
Forked from krabberod/BIO9905MERG1_V21BIO9905MERG1 – Bioinformatics for Environmental Sequencing (DNA metabarcoding)
R GNU General Public License v3.0 UpdatedApr 21, 2021 -
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ANCOM Public
Forked from FrederickHuangLin/ANCOM-Code-ArchiveR scripts for Analysis of Composition of Microbiomes (ANCOM).
R MIT License UpdatedMay 13, 2020 -
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PhotoRefT Public
Forked from lrubinat/PhotoRefTPhotoRefT: a 16S rDNA reference tree representing the main groups of picophototrophic eukaryotes and prokaryotes
UpdatedOct 8, 2019 -
PopCOGenT Public
Forked from philarevalo/PopCOGenTMicrobial Populations as Clusters Of Gene Transfer
Python UpdatedAug 23, 2019 -
EnDED Public
Forked from log-lab/EnDEDEnDED is a program that aims to detect environmentally-driven ("indirect") edges in an association network.
C++ GNU General Public License v3.0 UpdatedJul 8, 2019 -
amplicon_analysis_with_dada2 Public
Analysis of MiSeq amplicons using dada2
Shell UpdatedNov 19, 2018 -
DESMAN Public
Forked from chrisquince/DESMANDe novo Extraction of Strains from MetAgeNomes
Python Other UpdatedOct 26, 2018 -
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pr2_database Public
Forked from pr2database/pr2databaseProtist Ribosomal Reference database (PR2) - SSU rRNA gene database
UpdatedMar 7, 2018 -
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amplicon_processing Public
Scripts and workflows for MiSeq amplicon processing
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BM_V4_DB Public
Database including the most abundant OTUs (at 97% clustering) from pyroreads from the BioMarKs survey
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