Course to get into Large Language Models (LLMs) with roadmaps and Colab notebooks.

Programming Assignments and Quizzes from all courses within the Blockchain Specialization offered by The University at Buffalo and The State University of New York and key takeaways from study and …

🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

Tutorials on implementing a few sequence-to-sequence (seq2seq) models with PyTorch and TorchText.

GENA-LM is a transformer masked language model trained on human DNA sequence.

Public repo oktoberfest

IO related functionalities for oktoberfest.

Classification of 6 viruses including covid-19 based on their DNA sequences using Transformers

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

📖 Paper reading list in dialogue systems and natural language generation (constantly updating 🤗).

Core BioPerl 1.x code

SSHFS For Windows

Integrated toolkit for analysis and evaluation of annotated genomes

Repository for suggesting new lineages that should be added to the current scheme

Toturials coming with the "data science roadmap" picture.

Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project

Bioinformatics with Python Cookbook Second Edition, published by Packt

Repository For Codes And Concept Taught in Udemy Course

course about NGS data processing: genomics and transcriptomics

Code inspired by Bioinformatics Algorithms: an Active Learning Approach.

Student course material for the Applied Bioinformatics course at Scripps Research

Deep learning for identifying important motifs in DNA sequences. Exploration of the structure of the human genome by training neural network architectures (CNN, LSTM, Attention).

Repository of teaching materials, code, and data for my data analysis and machine learning projects.