QuaDBio Lab
- 97 followers
- Switzerland
- https://bsse.ethz.ch/qdb
- @TreutleinLab
Popular repositories Loading
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scRNAseq_analysis_vignette
scRNAseq_analysis_vignette PublicTutorial for scRNA-seq data analysis beginners using R
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scMultiome_analysis_vignette
scMultiome_analysis_vignette PublicTutorial of single-cell RNA-ATAC multiomic sequencing data analysis
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primate_cerebral_organoids
primate_cerebral_organoids PublicReusable scripts and functions archive for the paper "Organoid single-cell genomic atlas uncovers human-specific features of brain development" (https://www.nature.com/articles/s41586-019-1654-9)
Repositories
- sopa Public Forked from gustaveroussy/sopa
Technology-invariant pipeline for spatial omics analysis (Xenium / MERSCOPE / CosMx / PhenoCycler / MACSima / Hyperion) that scales to millions of cells
quadbio/sopa’s past year of commit activity - cellmapper Public
k-NN-based mapping of cells across representations to transfer labels, embeddings, and expression values.
quadbio/cellmapper’s past year of commit activity - organoid_patterning_screen Public
This repository contains the code to reproduce the analysis in the manuscript "Systematic neural organoid scRNA-seq screens measure morphogen response" (Sanchís-Calleja, Azbukina et al, 2025)
quadbio/organoid_patterning_screen’s past year of commit activity - iNeuron_patterning Public
quadbio/iNeuron_patterning’s past year of commit activity - task_predict_modality Public Forked from openproblems-bio/task_predict_modality
Predicting the profiles of one modality (e.g. protein abundance) from another (e.g. mRNA expression).
quadbio/task_predict_modality’s past year of commit activity
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