A C++ library for reading, writing, creating and modifying Microsoft Excel® (.xlsx) files.

Qt Node Editor. Dataflow programming framework

KLayout Main Sources

BS::thread_pool: a fast, lightweight, modern, and easy-to-use C++17 / C++20 / C++23 thread pool library

Fast, modern C++ DSP framework, FFT, Sample Rate Conversion, FIR/IIR/Biquad Filters (SSE, AVX, AVX-512, ARM NEON)

BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding

手动上传官网的VMwareWorkstation安装包

adapter trimmer for Oxford Nanopore reads

Matplot++: A C++ Graphics Library for Data Visualization 📊🗾

A basecaller for Oxford Nanopore Technologies' sequencers

基于Qt的串口调试助手，可绘制实时波形

Oxford Nanopore's Basecaller

A PyTorch Basecaller for Oxford Nanopore Reads

A curated list of awesome nanopore analysis tools.

A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment.

pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

A zero-phase digital filtering implementation in Python.

PyPy-compatible htslib routines for SAM/BAM alignment files

7-Zip with support for Brotli, Fast-LZMA2, Lizard, LZ4, LZ5 and Zstandard

Predictive kmer models for development use

Elegant Butterworth and Chebyshev filter implemented in C, with float/double precision support. Works well on many platforms. You can also use this package in C++ and bridge to many other languages…

Zstandard - Fast real-time compression algorithm

An et al. Nature Communications 2023

Data and analysis for NA12878 genome on nanopore

An automated adaptive and robust method to locate translocation events in solid-state nanopore current traces

Read level DNA methylation analysis of bisulfite converted sequencing data

Resilient backpropagation algorithm (RProp) optimizer implemented for Keras/TF

tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies

R package for CRAG

Resources for working with Axon Binary Format (ABF) Files