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This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.

Python 87 17 Updated Mar 20, 2025

The swiss army knife of lossless video/audio editing

TypeScript 37,295 1,815 Updated Jan 18, 2026

TCGA data acquisition and processing for Project Cognoma

Jupyter Notebook 22 28 Updated Apr 19, 2018

Curated list of TCGA resources

57 9 Updated Nov 10, 2017

Scripts to analyze TCGA data

R 128 46 Updated Mar 16, 2024

Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

Python 142 35 Updated Aug 5, 2021

📦R包:Make TCGA download and prepare easy!

R 150 21 Updated Sep 19, 2025

Microbial analysis in TCGA data

Jupyter Notebook 94 46 Updated Feb 23, 2024

TCGAbiolinks

R 342 122 Updated Oct 7, 2025

An open-source, cross-platform terminal for seamless workflows

Go 16,641 725 Updated Jan 19, 2026

"Paper2Slides: From Paper to Presentation in One Click"

Python 2,835 378 Updated Dec 31, 2025

ShinyCell2 is a lightweight R package for building interactive, shareable apps to explore single-cell multi-omics, scATAC-seq and spatial transcriptomics data with customizable, publication-ready v…

R 50 11 Updated Jun 1, 2025

Shiny Interactive Web Apps for Single-Cell Data

R 203 66 Updated Apr 24, 2025

Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection

Nextflow 310 207 Updated Jan 13, 2026

Moshi is a speech-text foundation model and full-duplex spoken dialogue framework. It uses Mimi, a state-of-the-art streaming neural audio codec.

Python 9,324 844 Updated Jan 8, 2026

A free, open source, and extensible speech-to-text application that works completely offline.

TypeScript 12,326 814 Updated Jan 19, 2026

Cross-platform game engine in Rust.

Rust 4,245 392 Updated Jan 4, 2026

采集和分析沪深股票财务数据

JavaScript 20 11 Updated Mar 3, 2023

High-performance time-series database for Industrial IoT and Analytics. 18.6M records/sec. Racing telemetry, smart cities, mining sensors, medical devices. DuckDB SQL + Parquet + Arrow. AGPL-3.0

Go 463 25 Updated Jan 17, 2026

Powerful menu bar manager for macOS

Swift 25,439 556 Updated Sep 20, 2025

OCR model that handles complex tables, forms, handwriting with full layout.

Python 4,512 506 Updated Jan 13, 2026

(ICLR 2025) TabM: Advancing Tabular Deep Learning With Parameter-Efficient Ensembling

Python 936 78 Updated Nov 10, 2025

Bili Insight,借助GPT洞察B站视频内容Chrome插件。它可以让你不用点开视频,以可视化的方式更快地了解视频的基本信息和总结内容。

JavaScript 73 7 Updated Jul 12, 2023

命令行投稿(B站)和视频下载工具,提供多种登录方式,支持多p。

Rust 1,076 139 Updated Nov 30, 2025

Official Python toolkit for the Qwen3-ASR API. Parallel high‑throughput calls, robust long‑audio transcription, multi‑sample‑rate support.

Python 742 66 Updated Oct 21, 2025

Build your personal knowledge base with Trilium Notes

TypeScript 34,196 2,261 Updated Jan 19, 2026

结合LightRAG 知识库的知识图谱智能体平台。 An agent platform that integrates a LightRAG knowledge base and knowledge graphs. Build with LangChain v1 + Vue + FastAPI, support DeepAgents、MinerU PDF、Neo4j 、MCP.

Python 3,947 479 Updated Jan 19, 2026

BibiGPT v1 · one-Click AI Summary for Audio/Video & Chat with Learning Content: Bilibili | YouTube | Tweet丨TikTok丨Dropbox丨Google Drive丨Local files | Websites丨Podcasts | Meetings | Lectures, etc. 音视…

TypeScript 5,870 791 Updated Feb 17, 2024

Solutions to Econometrics (Bruce Hansen, 2022)

TeX 38 8 Updated Mar 8, 2025

The math library of Lean 4

Lean 2,785 1,012 Updated Jan 19, 2026
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