Khan Computational Imaging Lab
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- Robarts Research Institute, Western University, London, Canada
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hippunfold
hippunfold PublicBIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
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neuroglia-helpers
neuroglia-helpers PublicHelper and wrapper scripts for using Singularity locally and on compute canada
Repositories
Showing 10 of 123 repositories
- zarrnii Public
Package for working with OME-Zarr and NIFTI images in a unified manner, with a focus on spatial transformations
khanlab/zarrnii’s past year of commit activity - heudiconv Public Forked from nipy/heudiconv
Flexible DICOM conversion into structured directory layouts
khanlab/heudiconv’s past year of commit activity - nibabel Public Forked from nipy/nibabel
Python package to access a cacophony of neuro-imaging file formats
khanlab/nibabel’s past year of commit activity - SPIMprep Public
A Snakemake workflow for pre-processing single plane illumination microscopy (SPIM, aka lightsheet microscopy)
khanlab/SPIMprep’s past year of commit activity - hippunfold Public
BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
khanlab/hippunfold’s past year of commit activity
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