Stars
PaCMAP: Large-scale Dimension Reduction Technique Preserving Both Global and Local Structure
Automated, smooth, N'th order derivatives of non-uniformly sampled time series data
Join subcellular Visium HD bins into cells
A set of python scripts for comparing similiarity between genesets using gene embeddings.
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
A nextflow pipeline to perform state-of-the-art genome-wide association studies.
A massively parallel, high-level programming language
Clockify Action for the Elgato Stream Deck
⏱️ Make time tracking a 🍰 piece of cake, with Toggl Track and Elgato Stream Deck (Toggl Track integration for Stream Deck)
Calibrated clustering via knockoffs for single-cell genomics
Performs a PheWAS analysis & generates a Manhattan plot using the PheWAS R package
PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
Model-based Dimensionality Reduction for Single-cell RNA-seq with Generalized Bilinear Models
a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.
GPU-accelerated force graph layout and rendering
Graphical tool to make photo collage posters
🧠💬 Articles I wrote about machine learning, archived from MachineCurve.com.
Free and open-source software that allows users to set animated desktop wallpapers and screensavers powered by WinUI 3.
Detecting intron retention from RNA-Seq experiments
An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.