Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

a Transformer-based neural network for generating highly optimized protein sequences called Regularized Latent Space Optimization (RELSO)

A short course on machine learning, with emphasis on "shallow" sequential models such as hidden Markov models (HMMs), conditional random fields (CRFs), Kalman and particle filters. NB: it dates fro…