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Complements Minimap2 for a fast and efficient Read-Until pipeline

C++ 13 2 Updated Mar 21, 2023

A C++ header-only library for reading Oxford Nanopore Fast5 files

C++ 1 Updated Oct 3, 2017

Predictive kmer models for development use

1 Updated Oct 28, 2017

python logistic regression demos

Python 1 Updated Mar 19, 2018

Legacy OpenCV Machine Learning Examples (2.4.x, C++)

C++ 1 Updated Mar 24, 2018

GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html

C++ 1 Updated Jan 13, 2019

Simple demonstration of separable convolutions

HTML 1 Updated Feb 12, 2019

Long Read Assembler

Python 1 Updated Apr 24, 2019

Event detection for nanopore sequencing

C++ 1 Updated Feb 26, 2019

Scripts to download genomes from the NCBI FTP servers

Python 1 1 Updated Dec 4, 2019
C++ 1 Updated Dec 12, 2019

Classifier for metagenomic sequences

C++ 1 1 Updated Dec 19, 2019

fast-cpp-csv-parser

C++ 1 Updated Apr 9, 2020
Shell 17 1 Updated Mar 21, 2023

Accelerated Dynamic Time Warping for ONT Read Until

Python 11 77 Updated Oct 2, 2024

A versatile pairwise aligner for genomic and spliced nucleotide sequences

C 1 Updated Feb 16, 2022