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AI Research Assistant for Ollama LLM : PDF collection interactions

Python 5 Updated Mar 25, 2025

PlantCAD: cross-species modeling of plant genomes

Python 58 6 Updated Dec 1, 2025

Efficient Permutation-based GWAS for Normal and Skewed Phenotypic Distributions

Python 33 3 Updated Nov 14, 2024
HTML 27 4 Updated Aug 29, 2025

A post-mapping authentication toolkit for ancient metagenomics

HTML 16 1 Updated Dec 11, 2025

Scripts, information and data for publication in APPS.

Python 5 Updated May 2, 2024

Quickly search, compare, and analyze genomic and metagenomic data sets.

Python 532 88 Updated Dec 22, 2025

CViT based tool for visualising VCF files.

JavaScript 6 8 Updated Mar 9, 2025

The fourth module of the 2018 Bioinformatics Community of Practice at BecA-ILRI Hub

Roff 3 8 Updated Jun 29, 2018

The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation

Nextflow 154 36 Updated Dec 11, 2025

For developers, who are building real-time data-driven applications, Redis is the preferred, fastest, and most feature-rich cache, data structure server, and document and vector query engine.

C 72,266 24,398 Updated Dec 26, 2025

expVIP. EXPression and VIsualisation Platform

Ruby 17 10 Updated Mar 8, 2023

R/Bioconductor package to interactively explore single cell clusters at multiple resolutions

R 10 3 Updated Mar 10, 2022

Vesalius: Dissecting Tissue Anatomy from Spatial Transcriptomic Data

R 20 9 Updated Sep 26, 2025

Create genome graph structures via RLZ compression.

C++ 8 1 Updated Jun 24, 2021

Python Driver for the BME280 Temperature/Pressure/Humidity Sensor from Bosch

Python 39 15 Updated Nov 28, 2023

Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

Python 106 18 Updated Dec 22, 2025

Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data and to select the best models in each locus.

Python 6 2 Updated Mar 15, 2021

A set of functions to visualise genotypes based on a VCF

R 87 17 Updated Jan 28, 2022

Genomics Extension for SQLite

C++ 168 10 Updated Sep 3, 2024

Simple HTML5 Charts using the <canvas> tag

JavaScript 66,934 11,997 Updated Dec 8, 2025

Repo per al primer workshop

1 1 Updated Sep 29, 2021

PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. This is a comprehensive upd…

C 479 141 Updated Dec 6, 2025

Utility to connect to open WiFi and click through "captive portal"-type agreements.

Ruby 363 41 Updated Apr 6, 2013

Repository to transfer gene models across (sub)genomes and check their coherence.

Jupyter Notebook 1 2 Updated Oct 16, 2020

Javascript full-stack framework for Big Data visualisation and analysis

JavaScript 46 13 Updated Dec 4, 2025

NHS.UK frontend contains the code you need to start building user interfaces for NHS websites and services.

JavaScript 663 119 Updated Dec 23, 2025

Bayesian haplotype-based mutation calling

C++ 322 36 Updated Nov 27, 2025

The rGriffin package is an R connector to Griffin. Gene Regulatory Interaction Formulator For Inquiring Networks (griffin) is a java library for inference and analysis of Boolean Network models. Gr…

R 7 2 Updated May 28, 2021

Software for in silico evolution - Paul François' group McGill University

Python 10 5 Updated Mar 16, 2022
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