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isomiR_celegans Public
isomiR identification pipeline, scripts for graph plotting
Perl UpdatedJul 9, 2023 -
Bioinfo_NGS_workflows Public
A collective team effort to provide NGS analysis workflows
R UpdatedMar 30, 2023 -
MFE_calculations Public
Calculate the maximum free energy for mIR duplex ends with 4bp
Raku UpdatedJun 8, 2022 -
NGS_analysis Public
A python based pipeline to analyse RNA-Seq and small RNA-seq reads data
Python UpdatedFeb 16, 2022 -
Pulling miRNA variants data from TIE database
Python UpdatedFeb 1, 2022 -
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GetnodeinJSON Public
This program retrieve the nodes and relations from Neo4J graph database and converted into JSON and CSV/TXT format for D3 visualization and tabular view in HTML
Python UpdatedSep 21, 2018 -
This program calculate the logFC and Pearson correlation coefficient (PCC) ' using normalized expression score of mRNAs/miRNAs between two conditions.