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ExUTR is a practical and powerful tool that enables rapid genome-wide 3'-UTR prediction from massive RNA-Seq data

Perl 6 6 Updated Jul 13, 2018

Tools for making plots of genomic datasets in a genome-browser-like format

Jupyter Notebook 32 2 Updated Dec 6, 2024

scDIOR: Single cell data IO softwaRe

HTML 150 12 Updated Feb 15, 2022

Ultra-fast clustering of very large single cell RNA-seq data

Jupyter Notebook 9 2 Updated Jun 3, 2021

Code for Universal Single-Cell Matching with Unpaired Feature Sets

Jupyter Notebook 21 3 Updated Jun 7, 2021

The uncompromising Python code formatter

Python 41,189 2,684 Updated Nov 26, 2025

Automated 3D cell detection in very large images

Python 220 63 Updated Nov 4, 2025

⚡ A Fast, Extensible Progress Bar for Python and CLI

Python 30,722 1,409 Updated May 22, 2025

Exploring dimension-reduced embeddings

HTML 111 10 Updated Jul 6, 2022

Reconstruct the lineage topology of a scRNA-seq differentiation dataset.

HTML 18 4 Updated Jun 25, 2020

Utilities for building and managing bioconda recipes

Python 103 134 Updated Nov 6, 2025

PRObabilistic Simulations of ScRNA-seq Tree-like Topologies

Python 26 10 Updated Jan 10, 2024

Webpage development for RSG-Germany

HTML 1 2 Updated Dec 2, 2018

Uniform Manifold Approximation and Projection

Python 8,002 856 Updated Nov 24, 2025

An r package to compute princial graphs

R 2 1 Updated Aug 4, 2017

A beautiful cross platform Desktop Player for Google Play Music

JavaScript 8,221 763 Updated Jan 4, 2023

https://habr.com/ru/post/276725/

Jupyter Notebook 566 59 Updated Jun 14, 2020

MMseqs2: ultra fast and sensitive search and clustering suite

C 1,900 256 Updated Nov 25, 2025