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MOFA+ in Python

Explore MOFA+ models with mofax in your browser. Powered by Dash from plotly.

See more on MOFA+ here. See more on Dash apps here.

Getting started

This library offers an interactive web dashboard to explore trained MOFA+ models and investigate latent factors and original features that drive variation in your data. Built on top of mofax, it makes it possible to work with fairly large models, which is especially important for single-cell omics data with increasingly large numbers of cells being profiled.

Installation

pip install git+https://github.com/gtca/mofax-dash

Launching

Provide a trained MOFA+ model when calling mofax to open it in a web dashboard:

mofax mofa_model.hdf5

Notes

To provide more efficiency when working with large datasets and large models, the data is not uploaded to the web browser (as in the MOFA+ shiny app), and a connection to the HDF5 file is created by the server instead.

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Interactive MOFA+ powered by mofax and Dash

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