Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

LLM inference in C/C++

This is to help people get forward signal of their inverse volatility allocation strategy. https://www.portfoliovisualizer.com/ used to provide this for free, but now it requires a subscription.

The next version of bwa-mem

SeaweedFS is a fast distributed storage system for blobs, objects, files, and data lake, for billions of files! Blob store has O(1) disk seek, cloud tiering. Filer supports Cloud Drive, cross-DC ac…

Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling

Run any Llama 2 locally with gradio UI on GPU or CPU from anywhere (Linux/Windows/Mac). Use `llama2-wrapper` as your local llama2 backend for Generative Agents/Apps.

Accelerated genomics workflows in NextFlow

DRAGEN open-source mapper

❗ This is a read-only mirror of the CRAN R package repository. metaMix — Bayesian Mixture Analysis for Metagenomic Community Profiling

A versatile pairwise aligner for genomic and spliced nucleotide sequences

Computation using data flow graphs for scalable machine learning

An Open Source Machine Learning Framework for Everyone

Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes

A tool for visualizing alignments of reads in regions containing tandem repeats

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

Hadoop Workflow System on Docker (http://cloudgene.uibk.ac.at)

Docker Image for Cloudera Hadoop MapReduce (MRv1)

Available Docker Apps for the Hadoop Workflow System Cloudgene