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Showing results

Documentation and tutorials on using Azure for biomedical research

Jupyter Notebook 7 2 Updated May 3, 2025

Random Composition in Red, Blue, and Yellow in the style of Piet Mondrian

JavaScript 41 10 Updated Nov 9, 2020

Cell type annotation with local Large Language Models (LLMs) - Ensuring privacy and speed with extensive customized reports

R 151 7 Updated Oct 25, 2024

An open access book on scientific visualization using python and matplotlib

Python 11,074 1,013 Updated Jan 22, 2024

Run local LLMs like llama, deepseek-distill, kokoro and more inside your browser

TypeScript 1,259 115 Updated Sep 7, 2025

A tool to find sequencing data and metadata from public databases.

Python 591 48 Updated Aug 13, 2024

Transcriptome Overlap Measure

R 6 3 Updated Feb 19, 2020

Example genomics data for tool developers

Shell 116 2 Updated Jul 7, 2024

A comprehensive cancer DNA/RNA analysis and reporting pipeline

Nextflow 89 27 Updated Oct 24, 2025

expressions on VCFs

Rust 86 4 Updated Apr 19, 2025

Raw extracted NFL Data

89 20 Updated Oct 24, 2025

Code and data for GeneGPT.

Python 415 33 Updated May 8, 2025

Defense Against the Dark Arts

Jupyter Notebook 79 1 Updated Jan 16, 2024

Method to identify temporal and sex-specific alternative splicing from multi-omic data, specifically RNA-seq + (CUT&RUN or ChIP-seq).

Shell 1 2 Updated Jul 22, 2022

Free American football data from StatsBomb

49 9 Updated Mar 28, 2024

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

Python 478 101 Updated Oct 25, 2025

API for herding data submissions

Python 12 19 Updated Oct 23, 2025

Sequence-to-graph mapper and graph generator

C 457 40 Updated Aug 11, 2025

DRAGEN open-source mapper

C++ 177 37 Updated Sep 8, 2023
Twig 2 Updated Oct 8, 2025

Isoform-level functional RNA-Seq analysis 🧬

R 34 3 Updated Oct 17, 2025
16 8 Updated Jun 16, 2023
C++ 36 2 Updated Jul 25, 2025

Annotated data.

Python 667 176 Updated Oct 24, 2025

muon is a multimodal omics Python framework

Python 252 31 Updated Oct 22, 2025

course material

Jupyter Notebook 133 19 Updated Jan 18, 2023

Examples and guides for using the OpenAI API

Jupyter Notebook 68,868 11,497 Updated Oct 24, 2025
Jupyter Notebook 457 34 Updated Oct 18, 2024

A fully convolutional architecture for basecalling nanopore RNA sequencing data

Python 11 3 Updated Sep 26, 2024
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