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Commits on Sep 14, 2021

• Merge pull request #1 from arthurvinx/add-license-1

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• Create LICENSE

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Commits on Aug 10, 2021

• Update README.md

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Commits on Aug 6, 2021

• Update README.md

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• Added command line link

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Commits on Aug 5, 2021

• Remove entrez test

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Commits on Jun 19, 2021

• Update README.md

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Commits on Jun 10, 2021

• Break annotate rules

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Commits on Jun 3, 2021

• Limit threads for kaiju-mkbwt

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Commits on May 31, 2021

• kaiju-mkbwt using threads

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Commits on May 28, 2021

• Break kaijuMakeDB due to the lack of an exit code

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• Megahit --force

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Commits on May 27, 2021

• Snakemake uses bash strict mode

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Commits on May 26, 2021

• Fix directory as input

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• Fix conda activate

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• Use-conda not needed

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• Fix result path

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• Fix functional target

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• Updated annotate rules

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Commits on May 25, 2021

• Fix taxonomic target

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• kaiju replacing basta

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Commits on May 20, 2021

• Update README.md

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Commits on May 19, 2021

• Header changed

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• Update readme

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• Delete envs directory

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Commits on Nov 16, 2020

• directory()

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Commits on Nov 11, 2020

• Fix path

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• Functional step finished

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Commits on Nov 3, 2020

• TODO createDictionary

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Commits on Nov 2, 2020

• taxonomic

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• alignment

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Commits on Oct 29, 2020

• force bowtie2-build to build a large index

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• Fixed bowtie2 rules

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• Delete README.txt

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Commits on Oct 28, 2020

• ruleorder

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