Stars
Universal Python binding for the LMDB 'Lightning' Database
Documentation for Ross Wightman's timm image model library
Pip package for amortized Shapley values and interactions in biological sequence models
systematic explanation of attribution-based mechanisms for regulatory genomics
Somatic coding and non-coding mutation enrichment analysis for tumor WGS data
upload big files to Zenodo using cURL, jq and bash
Creating beautiful plots of data maps
Statsmodels: statistical modeling and econometrics in Python
A learning rate range test implementation in PyTorch
InstaPrism is an R package for fast implementation of BayesPrism
Code and tutorials to visualise your data that is both beautiful *and* statistically valid
A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression
A CodecPipeline for zarr-python backed by the zarrs Rust crate
(ICLR 2025) TabM: Advancing Tabular Deep Learning With Parameter-Efficient Ensembling
GWAS gold standards repository
Oxbow makes genomic data ready for high-performance analytics.
A game theoretic approach to explain the output of any machine learning model.
Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)
A tool for automated uploading and version management of scientific data to Zenodo
The largest collection of PyTorch image encoders / backbones. Including train, eval, inference, export scripts, and pretrained weights -- ResNet, ResNeXT, EfficientNet, NFNet, Vision Transformer (V…
Data validation using Python type hints
[NeurIPS 2023, Spotlight] Rank-N-Contrast: Learning Continuous Representations for Regression