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ITK Public
Forked from InsightSoftwareConsortium/ITKInsight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dime…
C++ Apache License 2.0 UpdatedDec 16, 2025 -
FireANTs Public
Forked from rohitrango/FireANTsAdaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration
Jupyter Notebook Other UpdatedOct 14, 2025 -
pybids Public
Forked from bids-standard/pybidsPython tools for querying and manipulating BIDS datasets.
Python MIT License UpdatedSep 23, 2025 -
ANTsCentosBuildContainer Public
Centos 7 container with dev tools for building ANTs
Dockerfile Apache License 2.0 UpdatedJun 26, 2025 -
ANTsPy Public
Forked from ANTsX/ANTsPyAdvanced Normalization Tools in Python
Python Apache License 2.0 UpdatedJun 25, 2025 -
ANTs Public
Forked from ANTsX/ANTsAdvanced Normalization Tools (ANTs)
C++ Apache License 2.0 UpdatedJun 25, 2025 -
antsJacobianExample Public
Example Jacobian computation from a simple test case using ANTs CreateJacobianDeterminantImage
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NIfTIspace Public
Forked from rordenlab/NIfTIspaceA single NIfTI image saved with all 48 spatial rotation permutations
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antsDTOrientationTests Public
Data and code to test DT warping and reorientation in ANTs
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simnibsContainer Public
Forked from PennCNDS/simnibsContainerContainerized SimNIBS, base for Flywheel gear
Shell UpdatedJun 2, 2025 -
jacobianTests Public
Forked from stnava/jacobianTestsvery basic test of jacobian
R UpdatedMay 13, 2025 -
itkTensorReorientation Public
Exploring tensor reorientation using ITK transforms
Python Apache License 2.0 UpdatedMay 5, 2025 -
ANTsXContainers Public
Container building scripts for ANTsX tools
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ants-feedstock Public
Forked from conda-forge/ants-feedstockA conda-smithy repository for ants.
Shell BSD 3-Clause "New" or "Revised" License UpdatedFeb 28, 2025 -
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TemplateBuildingExample Public
Forked from ntustison/TemplateBuildingExampleJust when I thought you couldn’t possibly be any dumber, you go and do something like this… and totally redeem yourself!
Shell UpdatedFeb 12, 2025 -
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antsTransformTests Public
Tests for handling and applying ANTs transforms
Shell Apache License 2.0 UpdatedFeb 3, 2025 -
antsInstallExample Public
Simple bash script that downloads and installs ANTs in a unix environment
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antsRegistrationPreprocDemo Public
Python script that mirrors the "PreprocessImage" function in ANTs"
Python Apache License 2.0 UpdatedJan 24, 2025 -
SimpleITK Public
Forked from SimpleITK/SimpleITKSimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.
SWIG Apache License 2.0 UpdatedJan 24, 2025 -
TrimNeck Public
Script to do neck trimming on an anatomical image. Also reorients to LPI.
Python Apache License 2.0 UpdatedJan 2, 2025 -
HD-BET Public
Forked from MIC-DKFZ/HD-BETMRI brain extraction tool
Python Apache License 2.0 UpdatedDec 18, 2024 -
qsiprep Public
Forked from PennLINC/qsiprepPreprocessing and reconstruction of diffusion MRI
Python BSD 3-Clause "New" or "Revised" License UpdatedDec 10, 2024 -
surfplotContainer Public
Docker container for surfplot
Dockerfile Apache License 2.0 UpdatedNov 27, 2024 -
surfplotMesa Public
Forked from danjgale/surfplotA package for publication-ready brain surface figures
Python Other UpdatedNov 27, 2024 -
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bids-examples Public
Forked from bids-standard/bids-examplesA set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
MATLAB UpdatedOct 3, 2024 -
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trekkerContainer Public
Containerized version of trekker
Shell Apache License 2.0 UpdatedSep 11, 2024
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