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Starred repositories

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An implementation of an LRU Cache in Julia

Julia 69 22 Updated Nov 24, 2025

oh-my-zsh主题ys扩展,支持conda和virtualenv虚拟环境

Shell 28 9 Updated Nov 6, 2024

Extremely fast and accurate Nanopore demultiplexing

Rust 71 Updated Nov 23, 2025

Portable file server with accelerated resumable uploads, dedup, WebDAV, FTP, TFTP, zeroconf, media indexer, thumbnails++ all in one file, no deps

Python 37,743 1,525 Updated Nov 26, 2025

Julia's built-in stdout and stderr are global, and modifying them conventionally is not thread-safe. This package addresses this and allows each task to operate with isolated standard output and er…

Julia 2 Updated Oct 21, 2025

开源白板工具(SaaS),一体化白板,包含思维导图、流程图、自由画等。All in one open-source whiteboard tool with mind, flowchart, freehand and etc.

TypeScript 12,552 1,014 Updated Nov 27, 2025

⚡️Lightning-fast async download tool for bilibili and more

Python 1,771 175 Updated Sep 20, 2024

Embeddable genomic visualization component based on the Integrative Genomics Viewer

JavaScript 700 243 Updated Nov 13, 2025

#1 Locally hosted web application that allows you to perform various operations on PDF files

Java 70,322 5,940 Updated Nov 27, 2025

A high-performance distributed file system designed to address the challenges of AI training and inference workloads.

C++ 9,485 967 Updated Oct 24, 2025

A Julia-based job scheduler and workload manager inspired by Slurm, PBS and Crontab.

Julia 60 7 Updated Oct 21, 2025

Transforms complex documents like PDFs into LLM-ready markdown/JSON for your Agentic workflows.

Python 49,506 4,116 Updated Nov 27, 2025

A pure Unix shell script ACME client for SSL / TLS certificate automation

Shell 44,697 5,420 Updated Nov 25, 2025

Blog posts on best practices for Julia development

CSS 244 21 Updated Oct 8, 2025

Fast and extensible multi-platform HTTP/1-2-3 web server with automatic HTTPS

Go 68,154 4,536 Updated Nov 26, 2025

Code, unit tests, and tutorials for running PICRUSt2

Python 373 114 Updated Nov 27, 2025

MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies

Python 162 33 Updated Apr 16, 2025

Julia Animations and Visualizations

Julia 845 50 Updated Apr 16, 2024

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

Go 1,127 96 Updated Nov 20, 2025

A complete pipeline for metagenomic analysis

Scilab 439 86 Updated Nov 11, 2025

🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

Perl 453 99 Updated Dec 31, 2023

Sequence correction provided by ONT Research

Python 487 86 Updated Aug 19, 2025

Slides & code for my talks

JavaScript 341 107 Updated Nov 5, 2025

Fast and accurately polish the genome generated by long reads.

C 236 29 Updated Jan 9, 2025

Fast and accurate de novo assembler for long reads

C 397 54 Updated May 10, 2024

Reduce time-to-first-execution of Julia code

Julia 237 14 Updated Nov 24, 2025

Genome browser and variant annotation

C++ 385 10 Updated Oct 30, 2025

Viral infection diagnostics using next-generation sequencing

Python 43 22 Updated Nov 26, 2025

Voilà, install macOS on ANY Computer! This is really and magic easiest way! PVE 7.XX ~ 8.XX Support and macOS High Sierra ~ macOS Sequoia Support.

Shell 5,694 496 Updated Nov 5, 2025
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