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staries Public template
The *ies. A series of <star>-ies util snippets, scripts or templates that I use day to day.
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templates Public
Forked from lifebit-ai/templatesA library for generating template files
R Other UpdatedJun 26, 2023 -
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rnatoy Public
Forked from lifebit-ai/rnatoyA proof of concept RNA-Seq pipeline with Nextflow
Python UpdatedOct 10, 2022 -
patterns Public
Forked from nextflow-io/patternsA curated collection of Nextflow implementation patterns -- http://nextflow-io.github.io/patterns/index.html
Nextflow MIT License UpdatedSep 6, 2022 -
test-action-cloudos-cli Public
Github action to programmatically launch Lifebit CloudOS jobs using the official API client cloudos-cli
Shell UpdatedJul 24, 2022 -
action-custom-action Public template
Custom action creation example
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action-hadolint Public
Forked from reviewdog/action-hadolintRun hadolint with reviewdog 🐶
Shell MIT License UpdatedMay 10, 2022 -
repository-mirroring-action Public
Forked from pixta-dev/repository-mirroring-actionA GitHub Action for mirroring a repository to another repository
Shell MIT License UpdatedApr 27, 2022 -
add-branch-protection-rules Public
Programmatically add branch protection rules using gh cli
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R_vs_excel_workshop Public
Forked from lifebit-ai/R_vs_excel_workshopJupyter Notebook UpdatedOct 21, 2021 -
frankenspammer Public template
Forked from lifebit-ai/spammer-nfA stampede of processes at your fingertips
Nextflow UpdatedOct 19, 2021 -
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test_stage_lustre Public
Forked from lifebit-ai/test_stage_lustremini pipeline to test staging performance on lustre
Nextflow UpdatedSep 28, 2021 -
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splicing-pipelines-nf Public
Forked from TheJacksonLaboratory/splicing-pipelines-nfRepository for the Anczukow-Lab splicing pipeline
Nextflow UpdatedSep 1, 2021 -
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nextflow Public
Forked from spiralgenetics/nextflowNextflow pipelines
Nextflow UpdatedAug 18, 2021 -
Long-Read-Proteogenomics Public
Forked from sheynkman-lab/Long-Read-ProteogenomicsA workflow for Delineating the Human Proteome at Isoform Resolution by Integration of Long-read Proteogenomics and Mass Spectrometry.
Python MIT License UpdatedJul 5, 2021
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