Stars
A tool for creating and running Linux containers using lightweight virtual machines on a Mac. It is written in Swift, and optimized for Apple silicon.
A small tool to edit and upload FIT files produced by virtual cycling apps to Garmin Connect
Unlock your displays on your Mac! Flexible HiDPI scaling, XDR/HDR extra brightness, virtual screens, DDC control, extra dimming, PIP/streaming, EDID override and lots more!
Benchmarks of approximate nearest neighbor libraries in Python
Cleanlab's open-source library is the standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.
Benchmarks for classification of genomic sequences
MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.
Commit Mono is an anonymous and neutral programming typeface.
Probabilistic generative model that incorporates both the topology of interactions and node attributes to extract overlapping communities in directed and undirected multilayer networks.
Improving genome bins through the combination of different binning programs
Learning to untangle genome assembly with graph neural networks.
Google Research
Foundation Models for Genomics & Transcriptomics
Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting multiple structures
Transmembrane proteins predicted through Language Model embeddings
D2 is a modern diagram scripting language that turns text to diagrams.
A collection of scripts and notes related to genomics and bioinformatics
Overlapping clustering algorithm for biological and non-biological networks alike
🪡Correct and scaffold assemblies using long reads
Scalable long read self-correction and assembly polishing with multiple sequence alignment